BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E07SP1|AL426378
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1501 0.0
>3x_Contig1581
Length = 11429
Score = 1501 bits (752), Expect = 0.0
Identities = 775/788 (98%)
Strand = Plus / Minus
Query: 1 gatcaaaggaataagggtatagtaagttatattgttatattgtyttccttttgcgaatyt 60
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
Sbjct: 6095 gatcaaaggaataagggtatagtaagtcatattgttatattgtcttccttttgcgaatct 6036
Query: 61 ataatagcacacggtcgcgattggagataaagctttaacagaatgcaccaaggaaactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6035 ataatagcacacggtcgcgattggagataaagctttaacagaatgcaccaaggaaactgg 5976
Query: 121 aattaaagatgtggatttatgagaggtaatatgccctacaaattggaaaatacccattgg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5975 aatcaaagatgtggatttatgagaggtaatatgccctacaaattggaaaatacccattgg 5916
Query: 181 gaaagttgtataccatatgactttwgatggtaccaggaaagtgtttaatatgcatctcga 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5915 gaaagttgtataccatatgactttagatggtaccaggaaagtgtttaatatgcatctcga 5856
Query: 241 aaatgatccattcaaataagtgggtagaattccttccgggaagtttagaactgtattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5855 aaatgatccattcaaataagtgggtagaattccttccgggaagtttagaactgtattctt 5796
Query: 301 caattttgatgaagatacctgtkgtgcatgcaaatagttagcaaacgttacaaacgcgag 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5795 caattttgatgaagatacctgtggtgcatgcaaatagttagcaaacgttacaaacgcgag 5736
Query: 361 atatagcgatgcgcttagaaggaactgcaattccgttaaaccaacaggatgtggaaatcg 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5735 acatagcgatgcgcttagaaggaactgcaattccgttaaaccaacaggatgtggaaatcg 5676
Query: 421 ggataaaatggcttttgacaggtttgatgaaacagaagaagttatataccatataaggca 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5675 ggataaaatggcttttgacaggtttgatgaaacagaagaagtcatataccatataaggca 5616
Query: 481 taawatagatatgtgaacattcacttccggtaaatactcttgtacatccttgggaaatag 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5615 taaaatagatatgtgaacattcacttccggtaaatactcttgtacatccttgggaaatag 5556
Query: 541 attgacaaattgctctttccacgtctgattttgcagtcttctgacctcattgaacgaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5555 attgacaaattgctctttccacgtctgattttgcagtcttctgacctcattgaacgaagt 5496
Query: 601 tgaatgtttatgagacctgtwattttcctggaacggtatttgtacctggttgacaaagtt 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5495 tgaatgtttatgagacctgtaattttcctggaacggtatttgtacctggttgacaaagtt 5436
Query: 661 aacatctgawaatgttttattgatcgaaggacggcgcttcgaagtgacgctcttggaagt 720
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5435 aacatctgaaaatgttttattgatcgaaggacggcgcttcgaagtgacgctcttggaagt 5376
Query: 721 tacaatcatttttcgcttattttattcacaccttcttaaaatcaataaagcgagtggaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5375 tacaatcatttttcgcttattttattcacaccttcttaaaatcaataaagcgagtggaac 5316
Query: 781 rgagttga 788
||||||
Sbjct: 5315 gaagttga 5308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5409
Number of Sequences: 1807
Number of extensions: 5409
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)